Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015823443.1_cds_XP_016501465.1_15193
CDS Infomation

[gene=LOC107819829] [db_xref=GeneID:107819829] [protein=ankyrin repeat-containing protein At2g01680-like] [protein_id=XP_016501465.1] [location=join(29712..30030,30772..31181,33438..34310)] [gbkey=CDS]
Sequence

ATGGAGTCAAAGTCATTGAGACTGATAACCCATCAATCATTTTTCAGAGCCATTGGATCT
GGAGACCTTGAGTCTCTCAAAAACATCATCAATAATGAAGGGTTGGATCCATCTTCTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTCTGTTGGGCTTACAGAACGATGCAGGTGAAACT
GCTTTGTATATCGCTGCTGCCAATAACTTCCAGCAGATTGCAAGTTATTTGCTTGGATTC
TGTGATTTGGAGACTGCGTTGATCAGGTCCAAAGCTGATTTCAATGCCTTTCATGTTGCT
GCAAAAAATGGCCACTTGGGTATTGTGAGGGAACTTTTAGCCATGTGGCCTGGACTTTGT
AAAGTATGCAATGCCTCAAATACAAGCCCTCTTTATTCAGCTGCTGTCCAGGGACATTTG
GATGTTGTGAATGCCATTTTAGATGCAGATGCGAGCTCCATACGAATTGTTAGGAAGAAT
GGAAAGACTGCACTGCACACCGCTGCTAGGTATGGCCTTCAACATATCGTGAGAGCACTT
ATAGAGCGAGATCCAGATATAATATCCATCAAAGATAAAAAGGGTCAAACTGCACTTCAT
ATGGCTGTTAAAGGTCAGGATACTTCTGTGGTGGAGGAAATACTGGATACGGACAATTCA
ATATTGAATGAGCGTGACAAGAAGGGGAACACAGCGTTGCATATAGCCACACGGAAATGT
CGTCACCAGATCGTAAGCCTTCTGCTCACTTACACGTCCCTTGATGTCAATGCAATTAAT
AACCAAAAGGAAACTGCAATGGACTTAGCAGATAAACTACAATATGGAGACCTGACTTTG
TTAATTAAGGAAGCCCTGGCTGAGGCTGGTGCAAAACATGCCAGATTTGTGGGTCAATTT
GATGAAGCATCAGAACTTAAGAGGACTGTAAGTGACATTAAGCATGAGGTGCAGTCCCAG
CTTATACAAAACGAAAAGACCCGAAGGCGTGTTTCTGGTATTGCTAAAGAACTTAGGAAG
ATTCATAGAGAAGCTGTTCAGAATACCATTAACTCTGTGACTGTGGTTGCTGTTTTATTT
GCCTCTATTGCTTTTCTGGCTATATTCAGCTTGCCAGGCCAATATCTGGAGACTGGTCCT
GAAGCAGGAAAGGCCAGAATTGCCAATACTGTTGCGTTTCGTGTGTTCTGCCTCCTGAAT
GCTACCTCTCTCTTTATATCTCTCGCTGTTGTCGTCGTTCAGATTACTCTGGTTGCCTGG
GATACTAGAGCTCAAAAACAAATTGTCTCAGTCGTGAACAAGTTGATGTGGGCAGCCTGC
GTTAGTACTTGCGGAGCATTCCTAGCTGTTGGTTTCGTTGTTGTAGGGAAGAAAAGTTCA
TGGATGGCAATCACTATTACTGTGCTTGGTGCACCAATTCTTATTGGAACGCTGGTTAGC
TTGTGCTACTTCGTTTTCCGACAGCATTTTGGAATATGTGGTAGTGATTCTCAAAGGCGT
ATCAAAAGAGCAAGTGGGAGCAAATCTTTCTCGTGGTCATACTCTGCAAATATTTCTGAT
TTGGATGACTACAACTCTGATGAGAAAATTTATGCTCTGTGA

Peptide Sequence

PEP ID

XP_016501465.1
PEP Infomation

PREDICTED: ankyrin repeat-containing protein At2g01680-like [Nicotiana tabacum]
Sequence

MESKSLRLITHQSFFRAIGSGDLESLKNIINNEGLDPSSSSSSSSSSSSLLGLQNDAGET
ALYIAAANNFQQIASYLLGFCDLETALIRSKADFNAFHVAAKNGHLGIVRELLAMWPGLC
KVCNASNTSPLYSAAVQGHLDVVNAILDADASSIRIVRKNGKTALHTAARYGLQHIVRAL
IERDPDIISIKDKKGQTALHMAVKGQDTSVVEEILDTDNSILNERDKKGNTALHIATRKC
RHQIVSLLLTYTSLDVNAINNQKETAMDLADKLQYGDLTLLIKEALAEAGAKHARFVGQF
DEASELKRTVSDIKHEVQSQLIQNEKTRRRVSGIAKELRKIHREAVQNTINSVTVVAVLF
ASIAFLAIFSLPGQYLETGPEAGKARIANTVAFRVFCLLNATSLFISLAVVVVQITLVAW
DTRAQKQIVSVVNKLMWAACVSTCGAFLAVGFVVVGKKSSWMAITITVLGAPILIGTLVS
LCYFVFRQHFGICGSDSQRRIKRASGSKSFSWSYSANISDLDDYNSDEKIYAL

Transcript Sequence

Gene sequence data has not been registered.